SNP Profiles matching ICS 89

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CT	AA	GG	CT	TT	AA	CC	GT	CC	TT	AA	AA	CC	GG
1._ICS_89	CT	AA	CG	CT	TT	AA	CC	GT	CC	TT	AA	AA	CC	GG
2._ICS_89	CT	AA	CG	CT	TT	AA	CC	GT	CC	TT	AA	AA	CC	GG
3._ICS_89	CT	AA	CG	CT	TT	AA	CC	GT	CC	TT	AA	AA	CC	GG
4._ICS_89	CT	AA	CG	CT	TT	AA	CC	GT	CC	TT	AA	AA	CC	GG
5._ICS_89	CT	AA	CG	CT	TT	AA	CC	GT	CC	TT	AA	AA	CC	GG
6._GC-08-066-1-88	CT	AA	CG	CT	TT	AA	CC	GT	CC	TT	AA	AA	CC	GG
7._GC-08-066-1-88	CT	AA	CG	CT	TT	AA	CC	GT	CC	TT	AA	AA	CC	GG
8._GC-08-066-1-88	CT	AA	CG	CT	TT	AA	CC	GT	CC	TT	AA	AA	CC	GG
9._GC-08-066-1-88	CT	AA	CG	CT	TT	AA	CC	GT	CC	TT	AA	AA	CC	GG
10._GC-08-066-1-88	CT	AA	CG	CT	TT	AA	CC	GT	CC	TT	AA	AA	CC	GG

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	TT	AA	GG	TT	CC	CC	GT	GG	CT	CC	CC	TT	CT	CC
1._ICS_89	TT	AA	GG	TT	CC	CC	GT	GG	CT	CC	CC	TT	CT	CC
2._ICS_89	TT	AA	GG	TT	CC	CC	GT	GG	CT	CC	CC	TT	CT	CC
3._ICS_89	TT	AA	GG	TT	CC	CC	GT	GG	CT	CC	CC	TT	CT	CC
4._ICS_89	TT	AA	GG	TT	CC	CC	GT	GG	CT	CC	CC	TT	CT	CC
5._ICS_89	TT	AA	GG	TT	CC	CC	GT	GG	CT	CC	CC	TT	CT	CC
6._GC-08-066-1-88	TT	AA	GG	TT	CC	CC	GT	GG	CT	CC	CC	TT	CT	CC
7._GC-08-066-1-88	TT	AA	GG	TT	CC	CC	GT	GG	CT	CC	CC	TT	CT	CC
8._GC-08-066-1-88	TT	AA	GG	TT	CC	CC	GT	GG	CT	CC	CC	TT	CT	CC
9._GC-08-066-1-88	TT	AA	GG	TT	CC	CC	GT	GG	CT	CC	CC	TT	CT	CC
10._GC-08-066-1-88	TT	AA	GG	TT	CC	CC	GT	GG	CT	CC	CC	TT	CT	CC

	29	30	31	32	33	34	35	36	37	38	39
_Input profile	GG	GG	AT	CT	AA	AC	CT	GG	AC	AA	GG	X_X	X_X	X_X
1._ICS_89	GG	GG	AT	CT	AA	AC	CT	GG	AC	AA	GG	X_X	X_X	X_X
2._ICS_89	GG	GG	AT	CT	AA	AC	CT	GG	AC	AA	GG	X_X	X_X	X_X
3._ICS_89	GG	GG	AT	CT	AA	AC	CT	GG	AC	AA	GG	X_X	X_X	X_X
4._ICS_89	GG	GG	AT	CT	AA	AC	CT	GG	AC	AA	GG	X_X	X_X	X_X
5._ICS_89	GG	GG	AT	CT	AA	AC	CT	GG	AC	AA	GG	X_X	X_X	X_X
6._GC-08-066-1-88	GG	GG	AT	CT	AA	AC	CT	GG	AC	AA	GG	X_X	X_X	X_X
7._GC-08-066-1-88	GG	GG	AT	CT	AA	AC	CT	GG	AC	AA	GG	X_X	X_X	X_X
8._GC-08-066-1-88	GG	GG	AT	CT	AA	AC	CT	GG	AC	AA	GG	X_X	X_X	X_X
9._GC-08-066-1-88	GG	GG	AT	CT	AA	AC	CT	GG	AC	AA	GG	X_X	X_X	X_X
10._GC-08-066-1-88	GG	GG	AT	CT	AA	AC	CT	GG	AC	AA	GG	X_X	X_X	X_X

Input profile: ICS_89

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: San Juan Block1

Dapeng Zhang, 2016

1._ICS_89

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8188 7

Dapeng Zhang, 2016

2._ICS_89

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8188 6

Dapeng Zhang, 2016

3._ICS_89

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8188 5

Dapeng Zhang, 2016

4._ICS_89

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8188 3

Dapeng Zhang, 2016

5._ICS_89

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8188 2

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

6._ICS_89 GC-08-066-1-88

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

7._ICS_89 GC-08-066-1-88

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

8._ICS_89 GC-08-066-1-88

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

9._ICS_89 GC-08-066-1-88

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6

10._ICS_89 GC-08-066-1-88

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7

Key to SNP Markers

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1350	7	TcSNP1270	8	TcSNP1253	9	TcSNP1165	10	TcSNP1144
11	TcSNP1075	12	TcSNP1062	13	TcSNP1060	14	TcSNP998	15	TcSNP994
16	TcSNP953	17	TcSNP929	18	TcSNP917	19	TcSNP891	20	TcSNP872
21	TcSNP723	22	TcSNP645	23	TcSNP619	24	TcSNP591	25	TcSNP577
26	TcSNP560	27	TcSNP534	28	TcSNP529	29	TcSNP469	30	TcSNP429
31	TcSNP372	32	TcSNP242	33	TcSNP230	34	TcSNP193	35	TcSNP151
36	TcSNP150	37	TcSNP144	38	TcSNP32	39	TcSNP25